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Showing posts from July, 2019

Catalase Test

Antimicrobial Resistance

Resistance to antimicrobial agents typically occurs by one or more of the following mechanisms:                          1.  Inactivation of the drug      2. Alteration of the target        3.  Reduced cellular uptake      4.  Increased efflux.

Cultural and Biochemical Characteristics of Medically Important Bacteria

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Cultural & Biochemical Characteristics of Medically Important Bacteria | M4S M4S Microbiology for Students Digital Textbook Bacteriology • Cultural & Biochemical Identification Cultural and Biochemical Characteristics of Medically Important Bacteria Laboratory culture appearances and biochemical reactions compiled from the supplied MBLOGSTU source material. 10 Bacterial Groups Student Notes Culture Media Biochemical Tests Expand all Collapse all Print 0 of 10 chapters opened Contents 1. Staphylococcus aureus 2. Salmonella Typhi 3. Vibrio cholerae 4. Pseudomonas aeruginosa 5. Escherichia coli 6. Salmonella Paratyphi A 7. Klebsiella pneumoniae 8. Enterobacter cloacae 9. Acinetobacter spp. 10. Proteus mirabilis 🧫 1. Staphylococcus aureus › Colonies on Mannitol Salt Agar (MSA) Picture Credit: Ms. Samjhana Kapali Colonies ...

Mode of Action of Macrolides

Mode of Action of Macrolides Mode of Action of Macrolides: A Comprehensive Overview Overview Binding to the Ribosome Inhibition of Translocation Peptide Bond Formation and Ribosome Stalling Differences in Action Between 14- and 16-Membered Macrolides Recent Hypotheses and Unified Mechanisms Bacteriostatic and Bactericidal Effects Post-Antibiotic Effect Clinical Implications and Spectrum of Activity Conclusion References Overview Macrolides are a widely used class of antibiotics that play a crucial role in treating various bacterial infections. They are known for their ability to inhibit bacterial protein synthesis, thereby hindering bacterial growth and reproduction. The mode of action of macrolides, while studied extensively since the late 1950s, continues to be an area of active research and discovery [1] . Binding to the Ribosome The primary action of macrolides is the inhibition of bacterial protein synt...

Inducible Clindamycin Resistance (D test)

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Clindamycin has been utilized in the treatment of infections caused by Staphylococcus aureus . However, clinical failure to clindamycin therapy is of concern that has been reported due to several mechanisms including resistance to macrolide, lincosamide and streptogramin antibiotics [1]. Routine antibiotic susceptibility test for clindamycin alone may fail to detect inducible clindamycin resistance . In this matter, inducible clindamycin resistance test or D test  has resolved the problem so encountered. D test is in fact a simple test that utilizes the two disks clindamycin (2 μg) itself kept in the proximity of erythromycin (15μg)  (separated by a distance of  15 mm  between the edges). Plates are incubated at 37° C for 24 hr. Inducible resistance to Clindamycin  is defined as blunting of the clear circular area of no growth around the Clindamycin disc  on the side adjacent to the Erythromycin disc and is designated  as D-test positive. On the ...

Sequencing

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 Determination of nucleotide sequence in DNA is the important technique in molecular biology.  This technique was first developed by the two scientist groups in 1975.  Maxam AM and Gilbert W. American scientists at Havard University developed the nucleotide sequencing technique using the chemical method.  Sanger F, Niklen S and Coulson AR, the Bristish scientists at Cambridge successfully developed this technique using the enzymatic method.  Nowadays these techniques are widely used in molecular biology research.  The strategies for DNA sequencing consists of 4 steps: 1. Preparation of DNA template 2. Sequencing reaction 3. Electrophoresis 4. Analysis 1. Preparation of DNA template The DNA template used for sequencing can be prepared by several methods: a) Gene cloning  It is conventional method.  Isolate and purify genomic DNA.  Cut with appropriate restriction enzyme.  Cut sequencing vector with the same enzyme.  Insert DNA ...

Points on primer for DNA amplification in PCR

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Designing primers for DNA amplification, such as PCR (Polymerase Chain Reaction), involves several considerations to ensure specificity, efficiency, and successful amplification of the target DNA sequence. Here's a general guide on how to design primers: 1. Obtain Target DNA Sequence: Start by obtaining the target DNA sequence you want to amplify. This sequence should be unique and specific to your target gene or region of interest. 2. Primer Design Parameters: Primer Length : Primers are typically 18-22 nucleotides in length, although longer primers may be used for specific applications. GC Content : Aim for a GC content of 40-60%, as this contributes to primer stability and annealing specificity. Melting Temperature (Tm) : Ensure that the Tm of both primers is similar (within 2-3°C) to promote efficient annealing during PCR. Avoid Self-Complementarity : Check for self-complementarity or secondary structures in the primer sequences, as this can affect primer annealing and PCR effi...